Index

A

AUPRC (class in BLEval.AUPRC)

AUROC (class in BLEval.AUROC)

B

BLEval module BLEval.AUPRC module BLEval.AUROC module BLEval.BLTime module BLEval.Borda module BLEval.data module BLEval.EarlyPrecision module BLEval.evaluator module BLEval.Jaccard module BLEval.Motifs module BLEval.PathStats module BLEval.SignedEarlyPrecision module BLEval.Spearman module BLPlot module BLPlot.PlotAUPRC module BLPlot.PlotAUROC module BLPlot.PlotEPR module BLPlot.PlotEPRHeatmap module BLPlot.PlotSummaryHeatmap module

BLPlot.plotter module BLRun module BLRun.genie3Runner module BLRun.grisliRunner module BLRun.grnboost2Runner module BLRun.grnvbemRunner module BLRun.jump3Runner module BLRun.leapRunner module BLRun.pearsonRunner module BLRun.pidcRunner module BLRun.ppcorRunner module BLRun.runner module BLRun.scodeRunner module BLRun.scribeRunner module BLRun.scsglRunner module BLRun.sinceritiesRunner module BLRun.singeRunner module BLTime (class in BLEval.BLTime) Borda (class in BLEval.Borda)

D

DatasetGroup (class in BLEval.data)

E

EarlyPrecision (class in BLEval.EarlyPrecision)

EvaluationData (class in BLEval.data) Evaluator (class in BLEval.evaluator)

G

generateInputs() (BLRun.genie3Runner.GENIE3Runner method) (BLRun.grisliRunner.GRISLIRunner method) (BLRun.grnboost2Runner.GRNBoost2Runner method) (BLRun.grnvbemRunner.GRNVBEMRunner method) (BLRun.jump3Runner.JUMP3Runner method) (BLRun.leapRunner.LEAPRunner method) (BLRun.pearsonRunner.PearsonRunner method) (BLRun.pidcRunner.PIDCRunner method) (BLRun.ppcorRunner.PPCORRunner method) (BLRun.runner.Runner method) (BLRun.scodeRunner.SCODERunner method) (BLRun.scribeRunner.SCRIBERunner method) (BLRun.scsglRunner.SCSGLRunner method) (BLRun.sinceritiesRunner.SINCERITIESRunner method) (BLRun.singeRunner.SINGERunner method)

GENIE3Runner (class in BLRun.genie3Runner) get_algo_ids() (in module BLPlot.plotter) GRISLIRunner (class in BLRun.grisliRunner) GRNBoost2Runner (class in BLRun.grnboost2Runner) GRNVBEMRunner (class in BLRun.grnvbemRunner)

I

iter_datasets() (in module BLPlot.plotter)

iter_datasets_with_runs() (in module BLPlot.plotter)

J

Jaccard (class in BLEval.Jaccard)

JUMP3Runner (class in BLRun.jump3Runner)

L

LEAPRunner (class in BLRun.leapRunner)

load_dataset_metric() (in module BLPlot.plotter)

M

make_box_figure() (in module BLPlot.plotter) module BLEval BLEval.AUPRC BLEval.AUROC BLEval.BLTime BLEval.Borda BLEval.data BLEval.EarlyPrecision BLEval.evaluator BLEval.Jaccard BLEval.Motifs BLEval.PathStats BLEval.SignedEarlyPrecision BLEval.Spearman BLPlot BLPlot.PlotAUPRC BLPlot.PlotAUROC BLPlot.PlotEPR BLPlot.PlotEPRHeatmap BLPlot.PlotSummaryHeatmap BLPlot.plotter BLRun BLRun.genie3Runner BLRun.grisliRunner BLRun.grnboost2Runner BLRun.grnvbemRunner BLRun.jump3Runner BLRun.leapRunner BLRun.pearsonRunner BLRun.pidcRunner BLRun.ppcorRunner BLRun.runner BLRun.scodeRunner BLRun.scribeRunner BLRun.scsglRunner BLRun.sinceritiesRunner BLRun.singeRunner src src.BoolODE src.simulator src.utils

Motifs (class in BLEval.Motifs)

P

parseOutput() (BLRun.genie3Runner.GENIE3Runner method) (BLRun.grisliRunner.GRISLIRunner method) (BLRun.grnboost2Runner.GRNBoost2Runner method) (BLRun.grnvbemRunner.GRNVBEMRunner method) (BLRun.jump3Runner.JUMP3Runner method) (BLRun.leapRunner.LEAPRunner method) (BLRun.pearsonRunner.PearsonRunner method) (BLRun.pidcRunner.PIDCRunner method) (BLRun.ppcorRunner.PPCORRunner method) (BLRun.runner.Runner method) (BLRun.scodeRunner.SCODERunner method) (BLRun.scribeRunner.SCRIBERunner method) (BLRun.scsglRunner.SCSGLRunner method) (BLRun.sinceritiesRunner.SINCERITIESRunner method) (BLRun.singeRunner.SINGERunner method)

PathStats (class in BLEval.PathStats) PearsonRunner (class in BLRun.pearsonRunner) PIDCRunner (class in BLRun.pidcRunner) PlotAUPRC (class in BLPlot.PlotAUPRC) PlotAUROC (class in BLPlot.PlotAUROC) PlotEPR (class in BLPlot.PlotEPR) PlotEPRHeatmap (class in BLPlot.PlotEPRHeatmap) PlotSummaryHeatmap (class in BLPlot.PlotSummaryHeatmap) Plotter (class in BLPlot.plotter) PPCORRunner (class in BLRun.ppcorRunner)

R

random_classifier_baseline() (in module BLPlot.plotter) run() (BLRun.genie3Runner.GENIE3Runner method) (BLRun.grisliRunner.GRISLIRunner method) (BLRun.grnboost2Runner.GRNBoost2Runner method) (BLRun.grnvbemRunner.GRNVBEMRunner method) (BLRun.jump3Runner.JUMP3Runner method) (BLRun.leapRunner.LEAPRunner method) (BLRun.pearsonRunner.PearsonRunner method) (BLRun.pidcRunner.PIDCRunner method) (BLRun.ppcorRunner.PPCORRunner method) (BLRun.runner.Runner method) (BLRun.scodeRunner.SCODERunner method) (BLRun.scribeRunner.SCRIBERunner method) (BLRun.scsglRunner.SCSGLRunner method) (BLRun.sinceritiesRunner.SINCERITIESRunner method) (BLRun.singeRunner.SINGERunner method)

Runner (class in BLRun.runner) RunResult (class in BLEval.data)

S

SCODERunner (class in BLRun.scodeRunner) SCRIBERunner (class in BLRun.scribeRunner) SCSGLRunner (class in BLRun.scsglRunner) SignedEarlyPrecision (class in BLEval.SignedEarlyPrecision) SINCERITIESRunner (class in BLRun.sinceritiesRunner) SINGERunner (class in BLRun.singeRunner) Spearman (class in BLEval.Spearman)

src module src.BoolODE module src.simulator module src.utils module